Hippocalcin

Protein-coding gene in the species Homo sapiens
HPCA
Identifiers
AliasesHPCA, BDR2, DYT2, hippocalcin
External IDsOMIM: 142622; MGI: 1336200; HomoloGene: 55634; GeneCards: HPCA; OMA:HPCA - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for HPCA
Genomic location for HPCA
Band1p35.1Start32,885,994 bp[1]
End32,898,441 bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for HPCA
Genomic location for HPCA
Band4|4 D2.2Start129,005,363 bp[2]
End129,015,829 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • caudate nucleus

  • middle frontal gyrus

  • putamen

  • nucleus accumbens

  • external globus pallidus

  • prefrontal cortex

  • right frontal lobe

  • Region I of hippocampus proper

  • Brodmann area 10

  • dorsolateral prefrontal cortex
Top expressed in
  • CA3 field

  • dentate gyrus of hippocampal formation granule cell

  • superior frontal gyrus

  • olfactory tubercle

  • primary visual cortex

  • hippocampus proper

  • Region I of hippocampus proper

  • nucleus accumbens

  • perirhinal cortex

  • globus pallidus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • metal ion binding
  • actin binding
  • calcium ion binding
  • identical protein binding
  • kinase binding
Cellular component
  • perikaryon
  • dendrite membrane
  • neuronal cell body membrane
  • axon
  • dendritic spine head
  • dendrite cytoplasm
  • cytosol
  • extrinsic component of membrane
  • cytoplasm
  • membrane
  • postsynapse
  • glutamatergic synapse
Biological process
  • positive regulation of adenylate cyclase activity
  • response to organic cyclic compound
  • cellular response to monosodium glutamate
  • negative regulation of guanylate cyclase activity
  • positive regulation of phospholipase activity
  • activation of phospholipase D activity
  • brain development
  • retina development in camera-type eye
  • response to ketamine
  • response to L-glutamate
  • inner ear development
  • response to Aroclor 1254
  • calcium-mediated signaling
  • positive regulation of protein targeting to membrane
  • cellular response to electrical stimulus
  • cellular response to calcium ion
  • regulation of voltage-gated calcium channel activity
  • regulation of postsynaptic neurotransmitter receptor internalization
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3208

15444

Ensembl

ENSG00000121905

ENSMUSG00000028785

UniProt

P84074

P84075

RefSeq (mRNA)

NM_002143

NM_001130419
NM_010471
NM_001286081
NM_001286083

RefSeq (protein)

NP_002134

NP_001123891
NP_001273010
NP_001273012
NP_034601

Location (UCSC)Chr 1: 32.89 – 32.9 MbChr 4: 129.01 – 129.02 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Hippocalcin is a protein that in humans is encoded by the HPCA gene.[5][6]

Hippocalcin is a calcium-binding protein that belongs to the neuronal calcium sensor (NCS) family of proteins.[7][8] It is expressed in mammalian brains especially in the hippocampus. It possesses a Ca2+/myristoyl switch.[9]

Processes

Hippocalcin takes part in the following processes:

Interactions

Hippocalcin interacts with following proteins:

  • Neuronal apoptosis inhibitory protein (NAIP)
  • Mixed lineage kinase 2 (MLK2) – MLK2 is myosin light chain kinase 2
  • The b2 adaptin of the AP2 complex
  • Calcium-dependent activator protein for secretion (CADPS)

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000121905 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028785 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Takamatsu K, Kobayashi M, Saitoh S, Fujishiro M, Noguchi T (April 1994). "Molecular cloning of human hippocalcin cDNA and chromosomal mapping of its gene". Biochem. Biophys. Res. Commun. 200 (1): 606–11. doi:10.1006/bbrc.1994.1491. PMID 8166736.
  6. ^ Masaki T, Sakai E, Furuta Y, Kobayashi M, Takamatsu K (December 1998). "Genomic structure and chromosomal mapping of the human and mouse hippocalcin genes". Gene. 225 (1–2): 117–24. doi:10.1016/S0378-1119(98)00526-5. PMID 9931466.
  7. ^ Burgoyne RD (2007). "Neuronal Calcium Sensor Proteins: Generating Diversity in Neuronal Ca2+ Signalling". Nat. Rev. Neurosci. 8 (3): 182–193. doi:10.1038/nrn2093. PMC 1887812. PMID 17311005.
  8. ^ Burgoyne RD, O'Callaghan DW, Hasdemir B, Haynes LP, Tepikin AV (2004). "Neuronal Ca2+-sensor proteins: multitalented regulators of neuronal function". Trends Neurosci. 27 (4): 203–9. doi:10.1016/j.tins.2004.01.010. PMID 15046879. S2CID 24156457.
  9. ^ O'Callaghan DW, Tepikin AV, Burgoyne RD (2003). "Dynamics and calcium sensitivity of the Ca2+/myristoyl switch protein hippocalcin in living cells". J. Cell Biol. 163 (4): 715–721. doi:10.1083/jcb.200306042. PMC 2173692. PMID 14638856.

Further reading

  • Hidaka H, Okazaki K (1993). "Neurocalcin family: a novel calcium-binding protein abundant in bovine central nervous system". Neurosci. Res. 16 (2): 73–7. doi:10.1016/0168-0102(93)90074-Z. PMID 8387172. S2CID 4210072.
  • Nagao M, Hayashi H (2009). "Mixed lineage kinase 2 and hippocalcin are localized in Lewy bodies of Parkinson's disease". J. Neurol. Sci. 281 (1–2): 51–4. doi:10.1016/j.jns.2009.02.375. PMID 19332348. S2CID 13177773.
  • Kobayashi M, Takamatsu K, Saitoh S, et al. (1992). "Molecular cloning of hippocalcin, a novel calcium-binding protein of the recoverin family exclusively expressed in hippocampus". Biochem. Biophys. Res. Commun. 189 (1): 511–7. doi:10.1016/0006-291X(92)91587-G. PMID 1280427.
  • Nagata K, Puls A, Futter C, et al. (1998). "The MAP kinase kinase kinase MLK2 co-localizes with activated JNK along microtubules and associates with kinesin superfamily motor KIF3". EMBO J. 17 (1): 149–58. doi:10.1093/emboj/17.1.149. PMC 1170366. PMID 9427749.
  • Kobayashi M, Takamatsu K, Saitoh S, Noguchi T (1993). "Myristoylation of hippocalcin is linked to its calcium-dependent membrane association properties". J. Biol. Chem. 268 (25): 18898–904. doi:10.1016/S0021-9258(17)46711-1. PMID 8360179.
  • Rudinskiy N, Kaneko YA, Beesen AA, et al. (2009). "Diminished hippocalcin expression in Huntington's disease brain does not account for increased striatal neuron vulnerability as assessed in primary neurons". J. Neurochem. 111 (2): 460–72. doi:10.1111/j.1471-4159.2009.06344.x. PMID 19686238.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Mercer EA, Korhonen L, Skoglösa Y, et al. (2000). "NAIP interacts with hippocalcin and protects neurons against calcium-induced cell death through caspase-3-dependent and -independent pathways". EMBO J. 19 (14): 3597–607. doi:10.1093/emboj/19.14.3597. PMC 313967. PMID 10899114.
  • Ivings L, Pennington SR, Jenkins R, et al. (2002). "Identification of Ca2+-dependent binding partners for the neuronal calcium sensor protein neurocalcin delta: interaction with actin, clathrin and tubulin". Biochem. J. 363 (Pt 3): 599–608. doi:10.1042/0264-6021:3630599. PMC 1222513. PMID 11964161.
  • O'Callaghan DW, Haynes LP, Burgoyne RD (2005). "High-affinity interaction of the N-terminal myristoylation motif of the neuronal calcium sensor protein hippocalcin with phosphatidylinositol 4,5-bisphosphate". Biochem. J. 391 (Pt 2): 231–8. doi:10.1042/BJ20051001. PMC 1276920. PMID 16053445.
  • O'Callaghan DW, Ivings L, Weiss JL, et al. (2002). "Differential use of myristoyl groups on neuronal calcium sensor proteins as a determinant of spatio-temporal aspects of Ca2+ signal transduction". J. Biol. Chem. 277 (16): 14227–37. doi:10.1074/jbc.M111750200. PMID 11836243.
  • Markova 0, Fitzgerald D, Stepanyuk A; et al. (2009). "Hippocalcin signaling via site-specific translocation in hippocampal neurons". Neurosci. Lett. 442 (2): 152–7. doi:10.1016/j.neulet.2008.06.089. PMC 2572729. PMID 18634855.{{cite journal}}: CS1 maint: multiple names: authors list (link) CS1 maint: numeric names: authors list (link)

External links

  • NCS proteins
  • v
  • t
  • e
Cell membrane
Adhesion molecules
Calcium channels
Calcium pumps
GPCRs
Annexins
Intracellular signaling
Second messengers
Intracellular channels
Intracellular pumps
Sensors and chelators
Calcium-dependent chaperones
Calcium-dependent kinases
Calcium-dependent proteases
Indirect regulators
Extracellular chelators
Extracellular matrix proteins
Secreted hormones
Calcium-binding domains