60S ribosomal protein L37a

Protein found in humans
RPL37A
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UG0, 4V6X, 5AJ0, 3J92, 4UJE, 4UJD, 4D67, 4V5Z, 4UJC, 4D5Y

Identifiers
AliasesRPL37A, L37A, ribosomal protein L37a
External IDsOMIM: 613314; MGI: 98068; HomoloGene: 47964; GeneCards: RPL37A; OMA:RPL37A - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for RPL37A
Genomic location for RPL37A
Band2q35Start216,498,825 bp[1]
End216,579,180 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for RPL37A
Genomic location for RPL37A
Band1|1 C3Start72,750,449 bp[2]
End72,752,972 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • lactiferous duct

  • cerebellar vermis

  • caput epididymis

  • parietal pleura

  • nipple

  • endothelial cell

  • superficial temporal artery

  • pericardium

  • visceral pleura

  • corpus epididymis
Top expressed in
  • yolk sac

  • lip

  • morula

  • superior frontal gyrus

  • entorhinal cortex

  • spermatocyte

  • superior surface of tongue

  • spermatid

  • gallbladder

  • corneal stroma
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • structural constituent of ribosome
  • metal ion binding
  • protein binding
  • RNA binding
Cellular component
  • cytosol
  • ribosome
  • focal adhesion
  • intracellular anatomical structure
  • cytosolic large ribosomal subunit
  • extracellular exosome
  • nucleus
Biological process
  • viral transcription
  • SRP-dependent cotranslational protein targeting to membrane
  • translational initiation
  • nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  • protein biosynthesis
  • rRNA processing
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6168

19981

Ensembl

ENSG00000197756

ENSMUSG00000046330

UniProt

P61513

P61514

RefSeq (mRNA)

NM_000998

NM_009084

RefSeq (protein)

NP_000989

NP_033110

Location (UCSC)Chr 2: 216.5 – 216.58 MbChr 1: 72.75 – 72.75 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

60S ribosomal protein L37a is a protein that in humans is encoded by the RPL37A gene.[5][6]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L37AE family of ribosomal proteins. It is located in the cytoplasm. The protein contains a C4-type zinc finger-like domain. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000197756 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000046330 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Hoof T, Fislage R, Tummler B (Dec 1992). "Primary sequence of the human ribosomal protein L37a". Nucleic Acids Res. 20 (20): 5475. doi:10.1093/nar/20.20.5475. PMC 334360. PMID 1437567.
  6. ^ a b "Entrez Gene: RPL37A ribosomal protein L37a".

Further reading

  • Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–47. doi:10.1139/o95-101. PMID 8722009.
  • Kato S, Sekine S, Oh SW, et al. (1995). "Construction of a human full-length cDNA bank". Gene. 150 (2): 243–50. doi:10.1016/0378-1119(94)90433-2. PMID 7821789.
  • Saha DP, Tirumalai PS, Scala LA, Howells RD (1993). "Human ribosomal protein L37a: cloning of the cDNA and analysis of differential gene expression in tissues and cell lines". Gene. 132 (2): 285–9. doi:10.1016/0378-1119(93)90209-L. PMID 8224875.
  • Uechi T, Tanaka T, Kenmochi N (2001). "A complete map of the human ribosomal protein genes: assignment of 80 genes to the cytogenetic map and implications for human disorders". Genomics. 72 (3): 223–30. doi:10.1006/geno.2000.6470. PMID 11401437.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Odintsova TI, Müller EC, Ivanov AV, et al. (2004). "Characterization and analysis of posttranslational modifications of the human large cytoplasmic ribosomal subunit proteins by mass spectrometry and Edman sequencing". J. Protein Chem. 22 (3): 249–58. doi:10.1023/A:1025068419698. PMID 12962325. S2CID 10710245.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Ewing RM, Chu P, Elisma F, et al. (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Mol. Syst. Biol. 3 (1): 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.

External links

  • Overview of all the structural information available in the PDB for UniProt: P61513 (Human 60S ribosomal protein L37a) at the PDBe-KB.


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Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
  • aIF1
  • aIF2
  • aIF5
  • aIF6
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/​Mitochondrial
Archaeal/​Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts
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