60S ribosomal protein L19

Protein found in humans
RPL19
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UG0, 4V6X, 5A2Q, 5AJ0, 4UJE, 4UJD, 4D67, 4V5Z, 4UJC, 4D5Y

Identifiers
AliasesRPL19, L19, ribosomal protein L19
External IDsOMIM: 180466; MGI: 98020; HomoloGene: 68105; GeneCards: RPL19; OMA:RPL19 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for RPL19
Genomic location for RPL19
Band17q12Start39,200,283 bp[1]
End39,204,840 bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for RPL19
Genomic location for RPL19
Band11|11 DStart97,917,536 bp[2]
End97,921,318 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • lymph node

  • canal of the cervix

  • pituitary gland

  • anterior pituitary

  • gastric mucosa

  • skin of abdomen

  • gallbladder

  • superficial temporal artery

  • right lobe of thyroid gland
Top expressed in
  • thymus

  • urinary bladder

  • uterus

  • adrenal gland

  • ganglionic eminence

  • lens

  • pancreas

  • islet of Langerhans

  • lip

  • spleen
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • structural constituent of ribosome
  • protein binding
  • RNA binding
  • large ribosomal subunit rRNA binding
  • 5.8S rRNA binding
Cellular component
  • cytosol
  • ribosome
  • membrane
  • focal adhesion
  • intracellular anatomical structure
  • cytosolic large ribosomal subunit
  • polysomal ribosome
Biological process
  • protein biosynthesis
  • viral transcription
  • SRP-dependent cotranslational protein targeting to membrane
  • translational initiation
  • nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  • rRNA processing
  • cytoplasmic translation
  • liver regeneration
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6143

19921

Ensembl

ENSG00000108298

ENSMUSG00000017404

UniProt

P84098

P84099

RefSeq (mRNA)

NM_000981
NM_001330200

NM_001159483
NM_009078

RefSeq (protein)

NP_000972
NP_001317129

NP_001152955
NP_033104

Location (UCSC)Chr 17: 39.2 – 39.2 MbChr 11: 97.92 – 97.92 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

60S ribosomal protein L19 is a protein that in humans is encoded by the RPL19 gene.[5][6]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L19E family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000108298 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000017404 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Feo S, Davies B, Fried M (Jun 1992). "The mapping of seven intron-containing ribosomal protein genes shows they are unlinked in the human genome". Genomics. 13 (1): 201–7. doi:10.1016/0888-7543(92)90221-D. PMID 1577483.
  6. ^ a b "Entrez Gene: RPL19 ribosomal protein L19".

Further reading

  • Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–47. doi:10.1139/o95-101. PMID 8722009.
  • Kumabe T, Sohma Y, Yamamoto T (1992). "Human cDNAs encoding elongation factor 1 gamma and the ribosomal protein L19". Nucleic Acids Res. 20 (10): 2598. doi:10.1093/nar/20.10.2598. PMC 312399. PMID 1598220.
  • Chan YL, Lin A, McNally J, et al. (1987). "The primary structure of rat ribosomal protein L19. A determination from the sequence of nucleotides in a cDNA and from the sequence of amino acids in the protein". J. Biol. Chem. 262 (3): 1111–5. doi:10.1016/S0021-9258(19)75757-3. PMID 3542997.
  • Davies B, Fried M (1995). "The L19 ribosomal protein gene (RPL19): gene organization, chromosomal mapping, and novel promoter region". Genomics. 25 (2): 372–80. doi:10.1016/0888-7543(95)80036-L. PMID 7789970.
  • Henry JL, Coggin DL, King CR (1993). "High-level expression of the ribosomal protein L19 in human breast tumors that overexpress erbB-2". Cancer Res. 53 (6): 1403–8. PMID 8095182.
  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Uechi T, Tanaka T, Kenmochi N (2001). "A complete map of the human ribosomal protein genes: assignment of 80 genes to the cytogenetic map and implications for human disorders". Genomics. 72 (3): 223–30. doi:10.1006/geno.2000.6470. PMID 11401437.
  • Deprez PH, Sempoux C, De Saeger C, et al. (2002). "Expression of cholecystokinin in the duodenum of patients with coeliac disease: respective role of atrophy and lymphocytic infiltration". Clin. Sci. 103 (2): 171–7. doi:10.1042/CS20020033. PMID 12149109.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Bee A, Ke Y, Forootan S, et al. (2006). "Ribosomal protein l19 is a prognostic marker for human prostate cancer". Clin. Cancer Res. 12 (7 Pt 1): 2061–5. doi:10.1158/1078-0432.CCR-05-2445. PMID 16609016. S2CID 7231453.
  • Lederer CW, Torrisi A, Pantelidou M, et al. (2007). "Pathways and genes differentially expressed in the motor cortex of patients with sporadic amyotrophic lateral sclerosis". BMC Genomics. 8: 26. doi:10.1186/1471-2164-8-26. PMC 1796866. PMID 17244347.


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Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
  • aIF1
  • aIF2
  • aIF5
  • aIF6
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/​Mitochondrial
Archaeal/​Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts
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