TUBB1

Protein-coding gene in the species Homo sapiens
TUBB1
Identifiers
AliasesTUBB1, tubulin beta 1 class VI, MACTHC1
External IDsOMIM: 612901; MGI: 107814; HomoloGene: 69474; GeneCards: TUBB1; OMA:TUBB1 - orthologs
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)[1]
Chromosome 20 (human)
Genomic location for TUBB1
Genomic location for TUBB1
Band20q13.32Start59,019,429 bp[1]
End59,026,654 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for TUBB1
Genomic location for TUBB1
Band2|2 H4Start174,292,488 bp[2]
End174,299,675 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • monocyte

  • trabecular bone

  • blood

  • granulocyte

  • bone marrow

  • testicle

  • bone marrow cells

  • right lung

  • spleen

  • islet of Langerhans
Top expressed in
  • blood

  • spleen

  • body of femur

  • right lung lobe

  • embryo

  • yolk sac

  • bone marrow

  • abdominal wall

  • endocardial cushion

  • embryo
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • nucleotide binding
  • GTP binding
  • structural constituent of cytoskeleton
  • GTPase activity
Cellular component
  • cytoplasm
  • microtubule
  • extracellular exosome
  • cytoskeleton
  • microtubule cytoskeleton
Biological process
  • spindle assembly
  • microtubule-based process
  • microtubule cytoskeleton organization
  • mitotic cell cycle
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

81027

545486

Ensembl

ENSG00000101162

ENSMUSG00000016255

UniProt

Q9H4B7

A2AQ07

RefSeq (mRNA)

NM_030773

NM_001080971

RefSeq (protein)

NP_110400

NP_001074440

Location (UCSC)Chr 20: 59.02 – 59.03 MbChr 2: 174.29 – 174.3 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

TUBB1 is a gene that codes for the protein Tubulin beta-1 chain in humans.[5]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000101162 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000016255 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: TUBB1 tubulin, beta 1".

Further reading

  • Watts NR, Sackett DL, Ward RD, et al. (2000). "HIV-1 Rev Depolymerizes Microtubules to Form Stable Bilayered Rings". J. Cell Biol. 150 (2): 349–60. doi:10.1083/jcb.150.2.349. PMC 2180222. PMID 10908577.
  • Deloukas P, Matthews LH, Ashurst J, et al. (2002). "The DNA sequence and comparative analysis of human chromosome 20". Nature. 414 (6866): 865–71. Bibcode:2001Natur.414..865D. doi:10.1038/414865a. PMID 11780052.
  • Andersen JS, Lyon CE, Fox AH, et al. (2002). "Directed proteomic analysis of the human nucleolus". Curr. Biol. 12 (1): 1–11. doi:10.1016/S0960-9822(01)00650-9. PMID 11790298. S2CID 14132033.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Chen D, Wang M, Zhou S, Zhou Q (2004). "HIV-1 Tat targets microtubules to induce apoptosis, a process promoted by the pro-apoptotic Bcl-2 relative Bim". EMBO J. 21 (24): 6801–10. doi:10.1093/emboj/cdf683. PMC 139103. PMID 12486001.
  • Gevaert K, Goethals M, Martens L, et al. (2004). "Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides". Nat. Biotechnol. 21 (5): 566–9. doi:10.1038/nbt810. PMID 12665801. S2CID 23783563.
  • Yanagida M, Hayano T, Yamauchi Y, et al. (2004). "Human fibrillarin forms a sub-complex with splicing factor 2-associated p32, protein arginine methyltransferases, and tubulins alpha 3 and beta 1 that is independent of its association with preribosomal ribonucleoprotein complexes". J. Biol. Chem. 279 (3): 1607–14. doi:10.1074/jbc.M305604200. PMID 14583623.
  • Dou Z, Ding X, Zereshki A, et al. (2004). "TTK kinase is essential for the centrosomal localization of TACC2". FEBS Lett. 572 (1–3): 51–6. doi:10.1016/j.febslet.2004.06.092. PMID 15304323. S2CID 8403635.
  • Schulze H, Korpal M, Bergmeier W, et al. (2005). "Interactions between the megakaryocyte/platelet-specific beta1 tubulin and the secretory leukocyte protease inhibitor SLPI suggest a role for regulated proteolysis in platelet functions". Blood. 104 (13): 3949–57. doi:10.1182/blood-2004-03-1179. PMID 15315966.
  • Campbell GR, Pasquier E, Watkins J, et al. (2005). "The glutamine-rich region of the HIV-1 Tat protein is involved in T-cell apoptosis". J. Biol. Chem. 279 (46): 48197–204. doi:10.1074/jbc.M406195200. PMID 15331610.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • de Mareuil J, Carre M, Barbier P, et al. (2006). "HIV-1 Tat protein enhances Microtubule polymerization". Retrovirology. 2: 5. doi:10.1186/1742-4690-2-5. PMC 549075. PMID 15691386.
  • Giacca M (2006). "HIV-1 Tat, apoptosis and the mitochondria: a tubulin link?". Retrovirology. 2: 7. doi:10.1186/1742-4690-2-7. PMC 549042. PMID 15698476.
  • Freson K, De Vos R, Wittevrongel C, et al. (2005). "The TUBB1 Q43P functional polymorphism reduces the risk of cardiovascular disease in men by modulating platelet function and structure". Blood. 106 (7): 2356–62. doi:10.1182/blood-2005-02-0723. PMID 15956286.
  • Mesquita B, Veiga I, Pereira D, et al. (2006). "No significant role for beta tubulin mutations and mismatch repair defects in ovarian cancer resistance to paclitaxel/cisplatin". BMC Cancer. 5: 101. doi:10.1186/1471-2407-5-101. PMC 1199587. PMID 16095531.
  • Coiras M, Camafeita E, Ureña T, et al. (2006). "Modifications in the human T cell proteome induced by intracellular HIV-1 Tat protein expression". Proteomics. 6 (Suppl 1): S63–73. doi:10.1002/pmic.200500437. PMID 16526095. S2CID 42878271.
  • Navarro-Núñez L, Lozano ML, Rivera J, et al. (2007). "The association of the beta1-tubulin Q43P polymorphism with intracerebral hemorrhage in men". Haematologica. 92 (4): 513–8. doi:10.3324/haematol.10689. PMID 17488662.
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Human
Microfilaments
and ABPs
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Other
Intermediate
filaments
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(Keratin,
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Epithelial keratins
(soft alpha-keratins)
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(hard alpha-keratins)
Ungrouped alpha
Not alpha
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Microtubules
and MAPs
Tubulins
MAPs
Kinesins
Dyneins
Microtubule organising proteins
Microtubule severing proteins
Other
Catenins
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Other
Nonhuman
See also: cytoskeletal defects
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