CACNG4

Protein-coding gene in the species Homo sapiens
CACNG4
Identifiers
AliasesCACNG4, calcium voltage-gated channel auxiliary subunit gamma 4
External IDsOMIM: 606404; MGI: 1859167; HomoloGene: 8674; GeneCards: CACNG4; OMA:CACNG4 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for CACNG4
Genomic location for CACNG4
Band17q24.2Start66,964,707 bp[1]
End67,033,398 bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for CACNG4
Genomic location for CACNG4
Band11|11 E1Start107,623,183 bp[2]
End107,685,383 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • nucleus accumbens

  • putamen

  • caudate nucleus

  • amygdala

  • hypothalamus

  • entorhinal cortex

  • endothelial cell

  • inferior olivary nucleus

  • Brodmann area 46
Top expressed in
  • otic placode

  • saccule

  • habenula

  • nucleus accumbens

  • ganglionic eminence

  • olfactory bulb

  • dorsomedial hypothalamic nucleus

  • superior frontal gyrus

  • superior cervical ganglion

  • ciliary body
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • voltage-gated ion channel activity
  • channel regulator activity
  • calcium channel activity
  • voltage-gated calcium channel activity
  • calcium channel regulator activity
  • ionotropic glutamate receptor binding
Cellular component
  • endocytic vesicle membrane
  • plasma membrane
  • membrane
  • voltage-gated calcium channel complex
  • integral component of membrane
  • integral component of plasma membrane
  • AMPA glutamate receptor complex
  • somatodendritic compartment
  • cell surface
  • postsynaptic density
  • cell body
  • postsynaptic density membrane
  • L-type voltage-gated calcium channel complex
  • glutamatergic synapse
  • integral component of postsynaptic density membrane
Biological process
  • regulation of AMPA receptor activity
  • regulation of ion transmembrane transport
  • calcium ion transport
  • ion transport
  • transmission of nerve impulse
  • membrane depolarization
  • calcium ion transmembrane transport
  • response to cocaine
  • positive regulation of AMPA receptor activity
  • regulation of postsynaptic neurotransmitter receptor activity
  • positive regulation of synaptic transmission, glutamatergic
  • neurotransmitter receptor transport, postsynaptic endosome to lysosome
  • postsynaptic neurotransmitter receptor diffusion trapping
  • neurotransmitter receptor internalization
  • cardiac conduction
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

27092

54377

Ensembl

ENSG00000075461

ENSMUSG00000020723

UniProt

Q9UBN1

Q9JJV4

RefSeq (mRNA)

NM_014405

NM_019431

RefSeq (protein)

NP_055220

NP_062304

Location (UCSC)Chr 17: 66.96 – 67.03 MbChr 11: 107.62 – 107.69 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Voltage-dependent calcium channel gamma-4 subunit is a protein that in humans is encoded by the CACNG4 gene.[5][6]

L-type calcium channels are composed of five subunits. The protein encoded by this gene represents one of these subunits, gamma, and is one of several gamma subunit proteins. It is an integral membrane protein that is thought to stabilize the calcium channel in an inactive (closed) state. This gene is a member of the neuronal calcium channel gamma subunit gene subfamily of the PMP-22/EMP/MP20 family and is located in a cluster with two similar gamma subunit-encoding genes.[6]

See also

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000075461 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000020723 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Burgess DL, Davis CF, Gefrides LA, Noebels JL (Jan 2000). "Identification of Three Novel Ca2+ Channel γ Subunit Genes Reveals Molecular Diversification by Tandem and Chromosome Duplication". Genome Res. 9 (12): 1204–13. doi:10.1101/gr.9.12.1204. PMC 311002. PMID 10613843.
  6. ^ a b "Entrez Gene: CACNG4 calcium channel, voltage-dependent, gamma subunit 4".

Further reading

  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Moss FJ, Dolphin AC, Clare JJ (2004). "Human neuronal stargazin-like proteins, γ2, γ3 and γ4; an investigation of their specific localization in human brain and their influence on CaV2.1 voltage-dependent calcium channels expressed in Xenopus oocytes". BMC Neuroscience. 4: 23. doi:10.1186/1471-2202-4-23. PMC 270087. PMID 14505496.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Chu PJ, Robertson HM, Best PM (2002). "Calcium channel gamma subunits provide insights into the evolution of this gene family". Gene. 280 (1–2): 37–48. doi:10.1016/S0378-1119(01)00738-7. PMID 11738816.
  • Burgess DL, Gefrides LA, Foreman PJ, Noebels JL (2001). "A cluster of three novel Ca2+ channel gamma subunit genes on chromosome 19q13.4: evolution and expression profile of the gamma subunit gene family". Genomics. 71 (3): 339–50. doi:10.1006/geno.2000.6440. PMID 11170751.
  • Powers PA, Liu S, Hogan K, Gregg RG (1993). "Molecular characterization of the gene encoding the gamma subunit of the human skeletal muscle 1,4-dihydropyridine-sensitive Ca2+ channel (CACNLG), cDNA sequence, gene structure, and chromosomal location". J. Biol. Chem. 268 (13): 9275–9. doi:10.1016/S0021-9258(18)98346-8. PMID 8387489.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

  • v
  • t
  • e
Ligand-gated
Voltage-gated
Constitutively active
Proton-gated
Voltage-gated
Calcium-activated
Inward-rectifier
Tandem pore domain
Voltage-gated
Miscellaneous
Cl: Chloride channel
H+: Proton channel
M+: CNG cation channel
M+: TRP cation channel
H2O (+ solutes): Porin
Cytoplasm: Gap junction
By gating mechanism
Ion channel class
see also disorders