CSMD2

Protein-coding gene in the species Homo sapiens
CSMD2
Identifiers
AliasesCSMD2, dJ1007G16.1, dJ1007G16.2, dJ947L8.1, CUB and Sushi multiple domains 2
External IDsOMIM: 608398; MGI: 2386401; HomoloGene: 89034; GeneCards: CSMD2; OMA:CSMD2 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for CSMD2
Genomic location for CSMD2
Band1p35.1Start33,513,998 bp[1]
End34,165,842 bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for CSMD2
Genomic location for CSMD2
Band4|4 D2.2Start127,881,650 bp[2]
End128,461,449 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • buccal mucosa cell

  • ventricular zone

  • primary visual cortex

  • ganglionic eminence

  • Brodmann area 23

  • gonad

  • middle temporal gyrus

  • testicle

  • corpus callosum

  • sural nerve
Top expressed in
  • superior frontal gyrus

  • primary visual cortex

  • ventricular zone

  • facial motor nucleus

  • Rostral migratory stream

  • dentate gyrus of hippocampal formation granule cell

  • substantia nigra

  • prefrontal cortex

  • cervical ganglion

  • lens
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

114784

329942

Ensembl

ENSG00000121904

ENSMUSG00000028804

UniProt

Q7Z408

V9GX34

RefSeq (mRNA)

NM_001281956
NM_052896

NM_001281955
NM_001033413

RefSeq (protein)

NP_001268885
NP_443128

NP_001268884

Location (UCSC)Chr 1: 33.51 – 34.17 MbChr 4: 127.88 – 128.46 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

CUB and sushi domain-containing protein 2 is a protein that in humans is encoded by the CSMD2 gene.[5][6][7]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000121904 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028804 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Sun PC, Uppaluri R, Schmidt AP, Pashia ME, Quant EC, Sunwoo JB, Gollin SM, Scholnick SB (Jul 2001). "Transcript map of the 8p23 putative tumor suppressor region". Genomics. 75 (1–3): 17–25. doi:10.1006/geno.2001.6587. PMID 11472063.
  6. ^ Nagase T, Kikuno R, Ohara O (Sep 2001). "Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins". DNA Res. 8 (4): 179–87. doi:10.1093/dnares/8.4.179. PMID 11572484.
  7. ^ "Entrez Gene: CSMD2 CUB and Sushi multiple domains 2".

External links

Further reading

  • Gregory SG, Barlow KF, McLay KE, et al. (2006). "The DNA sequence and biological annotation of human chromosome 1". Nature. 441 (7091): 315–21. Bibcode:2006Natur.441..315G. doi:10.1038/nature04727. PMID 16710414.
  • Jordanova A, Irobi J, Thomas FP, et al. (2006). "Disrupted function and axonal distribution of mutant tyrosyl-tRNA synthetase in dominant intermediate Charcot-Marie-Tooth neuropathy". Nat. Genet. 38 (2): 197–202. doi:10.1038/ng1727. PMID 16429158. S2CID 16668375.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Lau WL, Scholnick SB (2004). "Identification of two new members of the CSMD gene family small star, filled". Genomics. 82 (3): 412–5. doi:10.1016/S0888-7543(03)00149-6. PMID 12906867.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.


  • v
  • t
  • e